Executes a Gaussian filter to reduce the noise in an MS experiment.
| pot. predecessor tools | NoiseFilterGaussian | pot. successor tools |
| FileConverter | PeakPickerWavelet | |
| Resampler | PeakPickerHiRes | |
| BaselineFilter |
The Gaussian filter is a peak area preserving low-pass filter and is characterized by narrow bandwidths, sharp cutoffs, and low passband ripple.
The command line parameters of this tool are:
NoiseFilterGaussian -- Removes noise from profile spectra by using Gaussian filter (on uniform as well as
non-uniform data).
Version: 1.11.1 Nov 14 2013, 11:18:15, Revision: 11976
Usage:
NoiseFilterGaussian <options>
This tool has algoritm parameters that are not shown here! Please check the ini file for a detailed descripti
on or use the --helphelp option.
Options (mandatory options marked with '*'):
-in <file>* Input raw data file (valid formats: 'mzML')
-out <file>* Output raw data file (valid formats: 'mzML')
Common TOPP options:
-ini <file> Use the given TOPP INI file
-threads <n> Sets the number of threads allowed to be used by the TOPP tool (default: '1')
-write_ini <file> Writes the default configuration file
--help Shows options
--helphelp Shows all options (including advanced)
The following configuration subsections are valid:
- algorithm Algorithm parameters section
You can write an example INI file using the '-write_ini' option.
Documentation of subsection parameters can be found in the doxygen documentation or the INIFileEditor.
Have a look at the OpenMS documentation for more information.
INI file documentation of this tool:
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:24 using doxygen 1.8.5 |