This is the complete list of members for AScore, including all inherited members.
| AScore() | AScore | |
| compute(PeptideHit &hit, RichPeakSpectrum &real_spectrum, DoubleReal fmt, Int number_of_phospho_sites) | AScore | |
| compute_site_determining_ions(std::vector< RichPeakSpectrum > &th_spectra, ProbablePhosphoSites &candidates, Int charge, std::vector< RichPeakSpectrum > &site_determining_ions) | AScore | |
| computeCumulativeScore(UInt N, UInt n, DoubleReal p) | AScore | |
| computeHighestPeptides(std::vector< std::vector< DoubleReal > > &peptide_site_scores, std::vector< ProbablePhosphoSites > &sites, std::vector< std::vector< Size > > &permutations) | AScore | |
| computePermutations_(std::vector< Size > tupel, Int number_of_phospho_sites) | AScore | |
| computeTupel_(AASequence &without_phospho) | AScore | |
| numberOfMatchedIons_(const RichPeakSpectrum &th, const RichPeakSpectrum &windows, Size depth, DoubleReal fmt) | AScore | private |
| peptideScore_(std::vector< DoubleReal > &scores) | AScore | private |
| ~AScore() | AScore | |