Widget for 2D-visualization of peak map and feature map data. More...
#include <OpenMS/VISUAL/Spectrum2DWidget.h>
Public Types | |
| typedef LayerData::ExperimentSharedPtrType | ExperimentSharedPtrType |
| Main managed data type (experiment) More... | |
Public Types inherited from SpectrumWidget | |
| typedef LayerData::ExperimentType | ExperimentType |
| Main data type (experiment) More... | |
| typedef LayerData::FeatureMapType | FeatureMapType |
| Main data type (features) More... | |
| typedef ExperimentType::SpectrumType | SpectrumType |
| Spectrum type. More... | |
Public Slots | |
| virtual void | recalculateAxes_ () |
| void | toggleProjections () |
| Shows/hides the projections. More... | |
| void | updateProjections () |
| Updates and shows the projections. More... | |
| virtual void | showGoToDialog () |
Public Slots inherited from SpectrumWidget | |
| void | showStatistics () |
| Shows statistics about the data (count, min, max, avg of intensity, charge, quality and meta data) More... | |
| void | showIntensityDistribution () |
| Shows the intensity distribution of the current layer. More... | |
| void | showMetaDistribution (const String &name) |
Shows the meta data distribution of vlaue name of the current layer. More... | |
| void | updateAxes () |
| Updates the axes by setting the right labels and calling recalculateAxes_();. More... | |
| void | updateHScrollbar (float min, float disp_min, float disp_max, float max) |
| Updates the horizontal scrollbar. More... | |
| void | updateVScrollbar (float min, float disp_min, float disp_max, float max) |
| Updates the vertical scrollbar. More... | |
| virtual void | showGoToDialog ()=0 |
| Shows a goto dialog. More... | |
| void | changeLegendVisibility () |
| Toggles the axis legend visibility. More... | |
Signals | |
| void | visibleAreaChanged (DRange< 2 > area) |
| Signal emitted whenever the visible area changes. More... | |
| void | showSpectrumAs1D (int index) |
Requests to display the spectrum with index index in 1D. More... | |
| void | showSpectrumAs1D (std::vector< int, std::allocator< int > > indices) |
| void | showCurrentPeaksAs3D () |
| Requests to display all spectra as 1D. More... | |
Signals inherited from SpectrumWidget | |
| void | sendStatusMessage (std::string, OpenMS::UInt) |
Emits a status message that should be displayed for time ms. If time is 0 the message should be displayed until the next message is emitted. More... | |
| void | sendCursorStatus (double mz=-1.0, double rt=-1.0) |
| Emitted when the cursor position changes (for displaying e.g. in status bar) More... | |
| void | aboutToBeDestroyed (int window_id) |
| Message about the destruction of this widget. More... | |
| void | openPreferences () |
| Shows the main preferences dialog. More... | |
| void | dropReceived (const QMimeData *data, QWidget *source, int id) |
| Signal that is emitted, when a drag-and-drop action ends on this widget. More... | |
Public Member Functions | |
| Spectrum2DWidget (const Param &preferences, QWidget *parent=0) | |
| Default constructor. More... | |
| virtual | ~Spectrum2DWidget () |
| Destructor. More... | |
| Spectrum2DCanvas * | canvas () |
| This method is overwritten to make the class specific members accessible. More... | |
| const Spectrum1DWidget * | getHorizontalProjection () const |
| const reference to the horizontal projection More... | |
| const Spectrum1DWidget * | getVerticalProjection () const |
| const reference to the vertical projection More... | |
| bool | projectionsVisible () const |
| Returns if one of the projections is visible (or both are visible) More... | |
Public Member Functions inherited from SpectrumWidget | |
| SpectrumWidget (const Param &preferences, QWidget *parent=0) | |
| Default constructor. More... | |
| virtual | ~SpectrumWidget () |
| Destructor. More... | |
| SpectrumCanvas * | canvas () |
| Returns a pointer to canvas object. More... | |
| SpectrumCanvas * | canvas () const |
| virtual AxisWidget * | xAxis () |
| Returns a pointer to the x-axis axis widget. More... | |
| virtual AxisWidget * | yAxis () |
| Returns a pointer to the y-axis axis widget. More... | |
| Int | getActionMode () const |
| Get the mouse action mode. More... | |
| virtual bool | isLegendShown () const |
| Returns if the axis labels are shown. More... | |
| virtual void | showLegend (bool show) |
| Shows/hides axis labels. More... | |
| void | setIntensityMode (SpectrumCanvas::IntensityModes mode) |
| Sets the intensity mode of the SpectrumCanvas. More... | |
| virtual void | hideAxes () |
| Hides x-axis and y-axis. More... | |
| virtual void | saveAsImage () |
| Saves the widget's content as image file. More... | |
| virtual Int | getWindowId () |
| getter for the EnhancedTabBar window id as defined in the interface More... | |
| virtual void | setWindowId (Int window_id) |
| setter for the EnhancedTabBar window id as defined in the interface More... | |
Public Member Functions inherited from EnhancedTabBarWidgetInterface | |
| virtual | ~EnhancedTabBarWidgetInterface () |
| Destructor. More... | |
Protected Member Functions | |
| virtual Math::Histogram | createIntensityDistribution_ () const |
| creates the intensity distribution of the current layer More... | |
| virtual Math::Histogram | createMetaDistribution_ (const String &name) const |
creates the meta data distribution of value name of the current layer More... | |
Protected Member Functions inherited from SpectrumWidget | |
| void | setCanvas_ (SpectrumCanvas *canvas, UInt row=0, UInt col=2) |
| Adds the canvas, axes and scrollbars to the layout. More... | |
| virtual void | intensityModeChange_ () |
| Switch between different intensitiy modes. More... | |
| virtual void | recalculateAxes_ ()=0 |
| recalculates the Axis ticks More... | |
| void | closeEvent (QCloseEvent *e) |
| void | dragEnterEvent (QDragEnterEvent *event) |
| void | dragMoveEvent (QDragMoveEvent *event) |
| void | dropEvent (QDropEvent *event) |
Protected Attributes | |
| Spectrum1DWidget * | projection_vert_ |
| Vertical projection widget. More... | |
| Spectrum1DWidget * | projection_horz_ |
| Horizontal projection widget. More... | |
| QGroupBox * | projection_box_ |
| Group box that shows information about the projections. More... | |
| QLabel * | projection_peaks_ |
| Number of peaks of the projection. More... | |
| QLabel * | projection_sum_ |
| Intensity sum of the projection. More... | |
| QLabel * | projection_max_ |
| Intensity maximum of the projection. More... | |
| QCheckBox * | projections_auto_ |
| Checkbox that indicates that projections should be automatically updated (with a slight delay) More... | |
| QTimer * | projections_timer_ |
| Timer that triggers auto-update of projections. More... | |
Protected Attributes inherited from SpectrumWidget | |
| SpectrumCanvas * | canvas_ |
| Pointer to the canvas widget. More... | |
| QGridLayout * | grid_ |
| Main layout. More... | |
| AxisWidget * | y_axis_ |
| Vertical axis. More... | |
| AxisWidget * | x_axis_ |
| Horizontal axis. More... | |
| QScrollBar * | x_scrollbar_ |
| Horizontal scrollbar. More... | |
| QScrollBar * | y_scrollbar_ |
| Vertical scrollbar. More... | |
| Int | window_id_ |
Private Slots | |
| void | horizontalProjection (ExperimentSharedPtrType, Spectrum1DCanvas::DrawModes) |
| shows the horizontal projection with the given data and draw mode More... | |
| void | verticalProjection (ExperimentSharedPtrType exp, Spectrum1DCanvas::DrawModes) |
| shows the vertical projection with the given data and draw mode More... | |
| void | projectionInfo (int peaks, double intensity, double max) |
| shows projections information More... | |
| void | autoUpdateProjections () |
| slot that monitors the visible area changes and triggers the update of projections More... | |
Widget for 2D-visualization of peak map and feature map data.
The widget is composed of two scroll bars, two AxisWidget and a Spectrum2DCanvas as central widget.
The example image shows Spectrum2DWidget displaying a peak layer and a feature layer.
Main managed data type (experiment)
| Spectrum2DWidget | ( | const Param & | preferences, |
| QWidget * | parent = 0 |
||
| ) |
Default constructor.
|
virtual |
Destructor.
|
privateslot |
slot that monitors the visible area changes and triggers the update of projections
|
inline |
This method is overwritten to make the class specific members accessible.
Referenced by TOPPViewBase::changeLabel(), TOPPViewBase::changeUnassigned(), TOPPViewBase::setIntensityMode(), TOPPViewBase::showCurrentPeaksAs2D(), and TOPPViewBase::updateToolBar().
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protectedvirtual |
creates the intensity distribution of the current layer
Implements SpectrumWidget.
|
protectedvirtual |
creates the meta data distribution of value name of the current layer
Implements SpectrumWidget.
| const Spectrum1DWidget* getHorizontalProjection | ( | ) | const |
const reference to the horizontal projection
Referenced by TOPPViewBase::showSpectrumWidgetInWindow().
| const Spectrum1DWidget* getVerticalProjection | ( | ) | const |
const reference to the vertical projection
Referenced by TOPPViewBase::showSpectrumWidgetInWindow().
|
privateslot |
shows the horizontal projection with the given data and draw mode
shows projections information
| bool projectionsVisible | ( | ) | const |
Returns if one of the projections is visible (or both are visible)
Referenced by TOPPViewBase::toggleProjections().
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virtualslot |
|
signal |
Requests to display all spectra as 1D.
|
virtualslot |
|
signal |
Requests to display the spectrum with index index in 1D.
|
signal |
|
slot |
Shows/hides the projections.
Referenced by TOPPViewBase::toggleProjections().
|
slot |
Updates and shows the projections.
|
privateslot |
shows the vertical projection with the given data and draw mode
|
signal |
Signal emitted whenever the visible area changes.
| area | The new visible area. |
|
protected |
Group box that shows information about the projections.
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protected |
Horizontal projection widget.
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protected |
Intensity maximum of the projection.
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protected |
Number of peaks of the projection.
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protected |
Intensity sum of the projection.
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protected |
Vertical projection widget.
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protected |
Checkbox that indicates that projections should be automatically updated (with a slight delay)
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protected |
Timer that triggers auto-update of projections.
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:36 using doxygen 1.8.5 |