"It looks like you need to patch /usr/share/initramfs-tools/init
If you want to continue without patching, you must
set patch_init_nosystemd to no in the config file.
If you don't patch init, your iso will probably not boot."
What does 'ls -l /sbin/init' show? Is it a symbolic link? And is it the same on both installations?
Try commenting out the extra lines in /usr/share/initramfs-tools/init and run 'update-initramfs -u' again.
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mount -n -o move /sys ${rootmnt}/sys
#nuke /sys
#ln -s ${rootmnt}/sys /sys
mount -n -o move /proc ${rootmnt}/proc
#nuke /proc
#ln -s ${rootmnt}/proc /proc"
I may need to change the test that decides whether the patch is needed or not.
Edit: I didn't see anything obvious in the package lists.